FastdRNA: a workflow for analysis of ONT direct RNA seq dataset

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FastdRNA is a pipeline written in snakemake to handle ONT direct RNA seq database.

The analysis includes :

  • dRNAmain: a module for basecalling. mapping and transcriptome count.
  • dRNAtail: a module for RNA poly(A) length estimate.
  • dRNAmodif: a module for RNA modification detection.
  • dRNAas: a module for alternative splicing analysis.
> ##### TIP
>
> If pipeline broken by some error, just type command again after you fix it.
> snakemake will automatically continue from the broken point
> 

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